there's quite a few considerations to attend to when fitting an aftermarket headunit with Bose:
1. powerwiring: wire #7 in the alfa powerwire ISO plug is the 'constant' +12V main powerwire, so ensure this goes to the YELLOW powerwire on the new headunit; if your car has an IGN/ACC wire, it will be in position #4 and should connect to the RED wire on the new headunit; if there's no wire #4, you will need to tap into an alternative 'switched' powerwire like the cigarette powerwire
2. audio: low-level audio connection; alfa provides a speakerwire ISO plug and this needs to connect to the RCA preouts on the new headunit; you will need an adapator to convert the RCA outputs to ISO
3. remote trigger wire to Bose amp: the 'remote output' wire on the new headunit (usually BLUE wire, but don't confuse with the ANTenna output wire) must connect to the wire in the alfa YELLOW mini-ISO plug; this triggers the Bose amp on/off when you turn the headunit on/off
maybe you haven't attended to point 3.
NB: post reported, to move to ICE forum
159SW Ti . 3.2 JTS . Q4 . Alfa Red - Black . ITG carbon induction
GT . 3.2 . Q2 . Kyalami Black - Red . Eibach . KONI . ASSO . ATP 19" . TAROX . FERODO . Mille Miglia exhaust
155 . 2.0 8V TS . Grigio Grey - Grey . H&R coilover . Enkei 17" . TAROX . GOODRIDGE . REMUS